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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | KHM99168.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bHLH | ||||||||
Protein Properties | Length: 426aa MW: 46242 Da PI: 6.2863 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40 | 7.2e-13 | 240 | 285 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L KHM99168.1 240 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 285 799***********************6.....5***************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF14215 | 6.6E-9 | 2 | 39 | IPR025610 | Transcription factor MYC/MYB N-terminal |
PROSITE profile | PS50888 | 17.39 | 236 | 285 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.32E-13 | 239 | 289 | No hit | No description |
SuperFamily | SSF47459 | 2.36E-18 | 239 | 305 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.3E-10 | 240 | 285 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.0E-18 | 240 | 305 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.9E-15 | 242 | 291 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 426 aa Download sequence Send to blast |
MFGLQTLVCI PSANGVVELA STEVIFQNPD LMNKVRDLFN FNNNPETGSW ALNCVATTDQ 60 GENDPSSLWL NPEIRDSSTV APPNSTVNKT LQFETPGSST LTDTPSAAAV HVPKSNGQGF 120 FSRELNFSNS LKPESGEILS FGESKKSSYN GSFFPGVVAI EENNKKRSPV SRSSIDDGML 180 SFTSLPAANI KSGSGGAGAG GGDSDHSDLE ASVAKQVVEP EKRPRKRGRK PANGREEPLN 240 HVEAERQRRE KLNQRFYALR AVVPNVSKMD KASLLGDAIS YINELKLKLN GLDSEKGELE 300 KQLDSAKKEL ELATKNPPPP PPPPPGLPPS NNEEAKKTTT KLADLEIEVK IIGWDAMIRI 360 QCSKKNHPAA RLMAALKDLD LEVHHASVSV VNDLMIQQAT VNMGNKFYTQ EQLLSALSSK 420 VGDEQR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 221 | 229 | KRPRKRGRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003516794.1 | 0.0 | PREDICTED: transcription factor MYC2-like | ||||
Swissprot | Q39204 | 1e-130 | MYC2_ARATH; Transcription factor MYC2 | ||||
TrEMBL | A0A0B2NV76 | 0.0 | A0A0B2NV76_GLYSO; Transcription factor MYC2 | ||||
STRING | GLYMA01G12740.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2938 | 33 | 64 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32640.1 | 1e-119 | bHLH family protein |
Publications ? help Back to Top | |||
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