PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHM99168.1
Organism
Glycine soja
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 426aa    MW: 46242 Da    PI: 6.2863
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHM99168.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH407.2e-13240285454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +h e+Er+RR+++N++f  Lr ++P+       K++Ka+ L  A+ YI++L
  KHM99168.1 240 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 285
                 799***********************6.....5***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142156.6E-9239IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088817.39236285IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.32E-13239289No hitNo description
SuperFamilySSF474592.36E-18239305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-10240285IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-18240305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.9E-15242291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MFGLQTLVCI PSANGVVELA STEVIFQNPD LMNKVRDLFN FNNNPETGSW ALNCVATTDQ  60
GENDPSSLWL NPEIRDSSTV APPNSTVNKT LQFETPGSST LTDTPSAAAV HVPKSNGQGF  120
FSRELNFSNS LKPESGEILS FGESKKSSYN GSFFPGVVAI EENNKKRSPV SRSSIDDGML  180
SFTSLPAANI KSGSGGAGAG GGDSDHSDLE ASVAKQVVEP EKRPRKRGRK PANGREEPLN  240
HVEAERQRRE KLNQRFYALR AVVPNVSKMD KASLLGDAIS YINELKLKLN GLDSEKGELE  300
KQLDSAKKEL ELATKNPPPP PPPPPGLPPS NNEEAKKTTT KLADLEIEVK IIGWDAMIRI  360
QCSKKNHPAA RLMAALKDLD LEVHHASVSV VNDLMIQQAT VNMGNKFYTQ EQLLSALSSK  420
VGDEQR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1221229KRPRKRGRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003516794.10.0PREDICTED: transcription factor MYC2-like
SwissprotQ392041e-130MYC2_ARATH; Transcription factor MYC2
TrEMBLA0A0B2NV760.0A0A0B2NV76_GLYSO; Transcription factor MYC2
STRINGGLYMA01G12740.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF29383364
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32640.11e-119bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]